CDS

Accession Number TCMCG081C09018
gbkey CDS
Protein Id XP_010650327.1
Location join(15363394..15363462,15363864..15363986,15365389..15365546,15366470..15366514,15373494..15373572,15373669..15373742,15389053..15389159,15393605..15393787,15403921..15404124,15404250..15404466,15404558..15404632,15404756..15405105,15405418..15405610,15405806..15406052,15406395..15406734,15407534..15407714,15407839..15407979,15408822..15409083,15409222..15409683,15410242..15410705,15414630..15414766,15414855..15415036,15415176..15415571,15416253..15416378,15416770..15416835,15416926..15418745,15418820..15419099,15420663..15420896,15431196..15431723,15431949..15432081,15433767..15434023)
Gene LOC100255444
GeneID 100255444
Organism Vitis vinifera

Protein

Length 2710aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_010652025.2
Definition PREDICTED: small subunit processome component 20 homolog [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCAACGTCGTTCCACGCTCAGGCAGTCAAGTCCCTTAACAAATCCTCCGGTCGCAAGCGTTTTGTATTCAAGAACTTTTCTCAGCGGCTAGAGGAAATTGAAATCGATGTCTTTAGGAGCCTTGATCCTCTCAAGACCGAGCCATCTGAGGGATCATCCTTTTTCCGTGACTGCCTTGTACAATGGAGGGAATTAAATACTGCAGAGGATTTTATTTCATTCTATGAGGAAATGATGCCCTTGGTACAAACACTACCCCAGGTGCTATTGCACAAGGAATTGATAATCTCAAAGGTTCTTGCTAGATTAGAAATGACAGCAAGATTATCACTTGAGCCTATGCTCAGGTTGATTGGAGCTTTATCAAGAGATCTCTTGGAGGACTTCTTCCCCTTTTTGCAGAGAGTTGTTGGTTCTTTGGTCTCTCTCCTCAAAAGTGGTGCCGACAGGGAACCAGAAATTATTGAACAGATTTTTACATCATGGTCTTATATTATGATGTATTTACAAAAGTATCTGATAAGAGACATTGTTCATGTTCTGAAGGTTACAGTTAAATTAAGATATTACCCCAAGGACTACGTTCAAGAATTTATGGCAGAGGCAGTATCATTCTTACTGAGGAATGCACCAGTTGAACAGCTGATAAAAGGTGTTAGAAAGATCATGTTGGAAGCTGTCAAAAAGCCATTACTTATGAGAAAATCAGGTGTCTGTGCTTTGTTTTATTATGCTATGAGAGGAACTTCATCCAGGTTTCATTCAAGAGCAGAGAAAGTATTGCGGTTATTGATGGATAGTTCCATTGTTGGAATTGGTGATGAGTTCACACAAGGTTCAGACAGTGTTGCTGAAGTCATAATTACCGTCTTTCAAAGATTATGTGAGGAGCTGGAGTCCAAGGAACTGAATTTGTTATGGGATTGCTTCTATGAGGATATAACTGAATGTGTAACTAATGGATGCTCCATGCATCTGACACGCCTGTTGTTTCTGCTTGTTTCTACTCTTCAAATTGATAATGGTCTTAAGATATCTGATTACCAACCAATGCTTGAACTTGTGAGGTTGCTTGTGCGAACGTTTATCATACCTTCTAATATTGTGGTGGCAGAGGACCATTTGTCTGAAATTGTTGATAAGGTTCTGCAGTTAATGCTTTGCATTCTTGATGGACTTCATATTTCTAATGATATGTCAACTATCTCTAGCCTTTCGTCGCAATGGGCACCTGCATTTGAATTAAGGAACCCAAGTTTGCTAAATTTTATTAAATCACTGCTTTCCAAGGACCCTTACATGGTATATACCTTCAGAATTAATATTTTAAGCGCAATGAATTCTTTAATAGAAACTTCACCAGAAGAAGTTATATTTCTGATGCTGATGTTCAATGAGAGATTGCAAGTGGATATGCAAAGCTCTAGTTTCTTAGTTGAGGCATCAGAAGAGGGAGTTTCAAGGATCTGCAGTTTCTTGCAGGAGGCCCTATTGTATTGGACTGGGGTGATAAATAATATAGTGCATAAGGATCTATCATCTGTTCCATCTTGTGAGGTGAAATTACCTATGCTGTGGGGAATCATTGGTTGCTGTTCTCATATGTTAGGTATCCAAGCAGACCCTTCCTTGTTAATGGGTTTGGTAGATGCTCTTGATCAACTTCTGATGATTGAAGCAGACAATGTTGCAGGTTTTCCTAAAAGCACTTGGCAAAGCTTAATGGGTGCGGCTTTAGGTTCTTTTCATAAATTAGGTTCTTTTAAAAAATCTGGAGTTGAAGAAACAAACAAATTTTTGCATCTTGCCAAACGATACAGATCATCTTCCCAAGTATTATTTTCTGTGGCTGAGTTGTTGGATTCCATGCATGGGTCTACAATCCAAGAAAACAATGGTCATATGAAATTTCATCCAGAGCTCAAAGCAGAGAAGGCTGTGGATGCATTTGACATGTTTTCTGAGAATTTGAGCCACCCAGACAAGGGTATTCGTGTTTCAACTCTGAGAATATTGTGTCACTATGAACCTCTGAATGGTGAATCAAATGTTCAGCCTGTTGAGAAGAAAATGCAAACTGAAGTTTCTCCTACTTCTTATGCGGAAATACAGCGCAATAATGTTCTTCACATCCTCTTTTCCATTGAAGATACTCCTCTTTCAATTTCTACCAGCAGGAAAGTTATTCTATCCATCTCTAAAATACAGATGGACCTCTCTGCTGCTAGGATTTGTGAAGCTTATATACCAGTTCTTTTGAACGGGATTATTGGCATTTTCCACAACCGATTTAGTTATTTATGGGATCCAGCAATTGAGTGCCTCTCAGTGCTGATTAGCAAACATGTTGGACTTGTATGGGACAGACTTGTTTCTTATCTTGAGCAATGCCAATCTGTATTTTTAACAACTCATGATCTATCAGAAGGGATTAACATTGAAGTCTGCGGCAAGACAAGTGAACTTGTTGAACGTTTCAATTTGTTTGTGAATCCTGCATCAGATAGCACACCATGTGCAACAGTATTATCCTTGTTGCTCCGGTGCTTACAAAAAATTCCAGTTGTCGTAGAATCTCGTTCCCGAAAAATTATACCTTCATTTTTGAAATTTTTGGGCTATGCTAATGATGATATCATGAGTGTGGGATCGTTCCATACACATGCTTGTAAAGGCAAAGAATGGAAGGGAGTCCTTAAAGAATGGTTGAACTTATTGAGAGTGATGCGGAACCCCAAGTCTTTTTATCGAAGTCAATTTCTTAAAGATGTTCTTCAAAATAGGCTTCTCGATGAAAATGATGCTGAAATACAAATGCAAGTTCTTGATTGCCTGTTATTTTGGAAAGATAATTTCTTACTACCATATGATCAGCATCTGAAAAACCTGATCAGTTCAAAAAATTTGAGAGAGGAACTCACAACATGGAGTTTATCCAGAGAATCTAATCTTGTTGAAGAGCAGCACAGAACTTGTCTTGTGCCTGTAGTTATTCGATTATTGGTACCAAAAGTCAGAAAATTGAAAACTCTCGCCTCCCGCAAGCACACGAGTGTACATCACCGAAAAGCAGTTCTGGCTTTTATAGCTCAACTTGATGTCAATGAGCTGGCTCTTTTTTTTGCGATGCTACTAAAGCCATTGCTGTCTATATCAAAGGGAAGTGATACTACTGCTGACTGGTTTTGGAGTTCACATGAAAATTACATGAATGACTTTCAAGCATTCAATGTCCTAAAGTTTTTCACTGTGGATAACATAAATTCCCTTTCTTGGAAGAAGAGATACGGTTTTTTGCATGTTATTGAAGATGTTCTTGAAGTTTTTGATGAATTCCATGTTATACCTTTTCTTGATCTGTTAATGGGTTGTGTTGTACGAGTGTTGGGGAGCTGCACATCAAGTCTTGAAAGTGCAAAGAGCTGTGGATATTCTCTGGTGGAAAATTATTCTAATGTCAACCTCAATGTACCTGAGAAAGATGGTGTAGTGGCAAATCCAATCATGACTAGCACTGCTGTGAAGCAGTTGAAGGATTTGAGGGCTTTGACCTTGAAGATCATTTCTCTTGCCCTTAATAAGTATGAGGATCATGATTTTGGTTATGAGTTCTGGGACCTATTCTTTACATCAGTGAAGCCTTTGGTTGATGGTTTCAAGCAGGAGGGTTCTAGTAGTGAGAAACCAAGTTCACTGTTCTCTTGCTTTGTTGCTATGAGTAGAAGCCACAATCTTGTATCATTATTGTACAGGGAAAAGAATCTTGTTGCTGATATATTTTCAATTTTAACTGTTACAACAGCATCTGAAGCTATTATATCTTGTGTTCTTAAGTTTATTGAGAACCTGTTGAACCTTGATAGCGAATTGGATGACGAAGACGTCACTATCAAAAAGGTTCTACTTCCGAACATTGAGACTCTTATCTGCAGTTTGCATTGTCTTTTCCAAAGTTGTAATGCAACAAAAAGGAAATTGGTCAAATATCCTGGAGAAACAGAGCTTAGAATTTTCAAATTGTTGTCAAAATATATAAAGGATCCATTGCAAGCAAGGAAATTCATTGATAACTTGCTCCCCTTTTTAGGAAAGAAAGCTCAGAATTCTGATGCATGTGTGGAAGCTTTGCAAGTTATTCGAGATATTATACCAGTTTCAGGGAGTGAAACTTCTCCAAAAATTTTGAATGCTGTTTCTCCTCTTCTAATTTCTGCTGGACTGGATATGCGTTTGGCTATTTGTGATCTTCTTGGTGTTCTTGCTGAAACCGACCCTTCGGTACTCTCTGTGGCAAAACTCATTAGTGAATTGAATGCGACCTCTGTTATGGAAATGGGTGGCCTGGATTATGACACCATAGTTCATGCTTATGAAAAGATGAGCATGGAGTTCTTTTATACTATCCCAGAGAATCAGGCACTGGTCATTTTGTCGCATTGTGTATATGATATGTCATCCAATGAACTGATCTTAAGGCACAGTGCATATAGGTTACTGGTTTCTTTTGTTGAATTCTCCATCCAAATTCTTAGACTTGAAGTGAAGAGTGGCCATGAAATGCCTGAAGCAATGGTAACATCCATAGCTGATGGTTGTTGGACTGAAGCATGCATTCAGCGCATGATAAACAAATTCCTTTTGAAGCATATGGCAGATGCAATGGGCAAGGAAACTTCTGTTCAGAAGGAATGGATTGATTTACTAAGAGAAATGGTGTTGAAGCTTCCAGAGGTGCCAAACCTTCACTCCTTCAAGATTTTGTGCAGTGATGACCCAGAAGTAGATTTTTTCAATAATATTCTTCACTTACAGAAGCATAGGAGATCAAGGGCATTATCACGCTTCAGGAATGCCATCAATGTAGAGGGTCTTCCAGAGGTCATCACCAATAAAGTTTTTGTCCCGCTTTTCTTAAATATGTTGTTTAATGTACAAGACGGGAAGGGTGAACATATCAGAAGTGCATGCTTGGAGACCCTTGCTTCTATTTGCGGTCACTTGGAATGGAAATCGTATTATGCATTATTAATGAGGTGCTTTCGGGAGATGACTGTTAAACCGGACAAACAAAAGGTGTTATTGCGTCTAATTTGTTCTATTCTGGACCAATTTCATTTTTTGGAAACTTGTTCAAGTCAAGAAGCTAAAGATTCCATGGATCATGTTTCAAGTACCTGCACCGCTGAAGCTAGTTCTTCAACTATGTTTCACAGTTGCACCAGTTCTGTTACAATCACTGAGATACAGACATGCCTTCATGATACTGTGTTCCCTAGGATACAGAAATTGCTGAATTCTGATTCAGATAAGGTTAATGTAAATATCAGCCTTGCTGCACTTAAATTGCTAAAGTTGCTTCCAGGGGATATCATGGAATCACAGCTTTCAAGTATTATCCATCGCATTTCAAACTTCCTAAGGAATCGCTTAGAAAGTGTTCGTGATGATGCTAGGTCTGCTTTGGCTGCATGTTTGAAGGAGCTTGGGCTGGAATACTTGCAGTTCATTGTCAGTGTCTTGCGAGCTACCTTGAAGCGAGGATATGAGCTGCATGTATTGGGATATACTCTCCATTTCATTTTGTCAAAGTGTCTTCCTATAAGTGGAAAGTTGGATTACTGCTTGGAAGATCTCCTTTCTATAGTAAAGAATGATATTCTTGGAGATGTTGCTGAGGAAAAAGAGGTTGAAAAGATAGCTTCAAAAATGAAAGAGACAAGAAAGCGCAAATCTTTTGAGACCTTGAAATTGATTGCTCAAAGCATCATGTTCAAAAGCCATGCCCTGAAGCTCCTTTCACCTGTTATAGCTCATCTGCAGAACCATCTGACACCAAAAGTGAAGTTGAACTTGGAAACTATGTTAAATCACATAGCTGCTGGTATTGAATGCAATCCATCTGTAGACCAGACTGATCTATTCATCTTTGTATATGGCCTTGTTGAAGATGGGATTTCTAAAGAAAATTGTCGAGGTGAACATTCAGCAGTCATGGAGACAAATGAAAAACGCAAGACTGATGAGCCAAGGAAGAAAGTTTCTCTAGGGAAGGTTGTGGGCTCTGAGTCACACTATGCACATCTGATTACGGTATTTGCCCTTGGGCTGTTGCACAACCGTATCAAGAACATGAAACTGAACAAAAAGGATGGACAACTTTTATCAATGTTGGACCCTTTTGTCAAACAACTGGGAAGCTGCCTAAGTTCTAAGTATGAAGATATATTATCTGCTGCTCTTAGATGCATTGCTTTATTGGTTAGGCTGCCTTTGCCAGCTCTTGAAACCCAAGCTGATGGAATAAAGTCTGCTCTACTGGATATTGCCCAAAGTTCAGTAAATGCAAACAGTCCTCTGATGCAGTCATGTCTAAGTTTGTTAACAGCACTTCTGCGGAGCACTAAAATTACCCTTTCCACTGATCAATTACATCTGTTGATCCAATTTCCACTGTTTGTTGATCTTGAAAGGAATCCTTCTTTTATTGCCCTCTCTCTCTTAAAGGCAATTATTAGCCGCAAGCTGGTTGTGCATGAGATATATGATGTTGTCACTCGAGTTGCAGAATTGATGGTAACAAGTCAAGTGGAGCCAATTCGTAAGAAATGCAGTCAAATTTTATTGCAATTCTTGCTTGATTATCATCTTTCTGAAAAACGCTTGCAACAACATCTGGATTTCTTGCTTGCGAATCTCAGATATGAGCATTCAACCGGAAGAGAAACTGTGCTTGAAATGATCCATACGATTATAATCAAGTTTCCAAAAAGCATTGTGGATGAGCAGTCCCAGACATTATTTGTCCATTTAGTGGTTTGCTTGACTAATGATCAAGACAATAAAGTCCGCTCCATGATTGGTGCAGCTATAAAGCTTTTGATTGGACGTATAAGCCCACATTCACTTCATCCCATTATTGAGTACAGTCTCTCTTGGTATTTGGGTGAAAAGCAGCAACTATGGAGTGCTGCAGCACAGGTCTTGGGGTTCATGATTGAGGTCATGAAGAAAGGATTTCAAAGACATATTGAGAGTGTTTTACCGGTGATGAGAAGCATTTTGCGGTTGGCTGTTAAATGTGGTACTGATAACCAACTAGATCTTTCTAATGATGTTGCAATTCCTCTCTGGAAGGAGGCATATTATTCTTTGGTCATGTTGGAAAAGATGCTACAACAGTTCCATGAATTGTGCTTGCAAAGGGAGCTTGAGGATATATGGGAAGTGATCTGTGATTTTCTGTTGCACCCACACATGTGGTTACGAAACATCTCCAGCCGCCTTGTGGCCTTTTACTTTACTGCAGTAAATGAGGCTAACAGAGAAAAAAATGAAAAGTCAATAGAAACATTTTCTCTTGTGAGACCAAGTAGACTTTTCATGATAGCTGTTTCCCTCTGCTGCCAACTGAAGGCACAACTCGCTGATGATGCAGCCAGCAACCTGATCACACAAAATCTCGTCTTTGCAATTTGTGGTGTGCATTCTTTCGTGGGGCAAAAAGAACATGTGGATCCTCACCAGTTTTGGAGTGCCATTGAACAGCACGAGCAAGAGCATTTTCTTAAAGCTTTTCAGTTGCTTGATTCAAGAAAAGGAAGAAGCATTTTCGAATCTTTTATGTCTAGTCGTATACACAATCTCAATGACCAAGGAAACAATGAGGATCTCCGACATCTGCTTGTCTCTAGTTTGCTTAAAAGAATGGGAAAGATTGCCCTTCAAATGGAGGCAATTCAGATGAAAATTGTCTTCAATAGCTTTAGAACAATTTCAACAACAATTGGTCAAGAGGAGTGTCAGCATTATGCATTTCAAATGCTGCTACCATTGTACAAAGTTTGTGAAGGATTTTCTGGGAAAGTCATTTCAGATGAGGTGAAGCAATTAGCACAGGAAGTTAGTGAAAGTATAAGAGATACCTTAGGAATCCAGAATTTTGTACAAGTTTACAGCCATATCAGGAAGAAGCTGAAGGCAAAGAGAGATAAGAGGAAACAAGAAGAAAAGCTTATGGCTGTGGTCAACCCAATGCGGAACGCAAAGAGGAAGCTGAGGATTGCAGCCAAGCATCGAGCTCACAAGAAAAGGAAAATAATGACAATGAAGATGGGGAGATGGGTTCGTTAA
Protein:  
MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEIDVFRSLDPLKTEPSEGSSFFRDCLVQWRELNTAEDFISFYEEMMPLVQTLPQVLLHKELIISKVLARLEMTARLSLEPMLRLIGALSRDLLEDFFPFLQRVVGSLVSLLKSGADREPEIIEQIFTSWSYIMMYLQKYLIRDIVHVLKVTVKLRYYPKDYVQEFMAEAVSFLLRNAPVEQLIKGVRKIMLEAVKKPLLMRKSGVCALFYYAMRGTSSRFHSRAEKVLRLLMDSSIVGIGDEFTQGSDSVAEVIITVFQRLCEELESKELNLLWDCFYEDITECVTNGCSMHLTRLLFLLVSTLQIDNGLKISDYQPMLELVRLLVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDGLHISNDMSTISSLSSQWAPAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLIETSPEEVIFLMLMFNERLQVDMQSSSFLVEASEEGVSRICSFLQEALLYWTGVINNIVHKDLSSVPSCEVKLPMLWGIIGCCSHMLGIQADPSLLMGLVDALDQLLMIEADNVAGFPKSTWQSLMGAALGSFHKLGSFKKSGVEETNKFLHLAKRYRSSSQVLFSVAELLDSMHGSTIQENNGHMKFHPELKAEKAVDAFDMFSENLSHPDKGIRVSTLRILCHYEPLNGESNVQPVEKKMQTEVSPTSYAEIQRNNVLHILFSIEDTPLSISTSRKVILSISKIQMDLSAARICEAYIPVLLNGIIGIFHNRFSYLWDPAIECLSVLISKHVGLVWDRLVSYLEQCQSVFLTTHDLSEGINIEVCGKTSELVERFNLFVNPASDSTPCATVLSLLLRCLQKIPVVVESRSRKIIPSFLKFLGYANDDIMSVGSFHTHACKGKEWKGVLKEWLNLLRVMRNPKSFYRSQFLKDVLQNRLLDENDAEIQMQVLDCLLFWKDNFLLPYDQHLKNLISSKNLREELTTWSLSRESNLVEEQHRTCLVPVVIRLLVPKVRKLKTLASRKHTSVHHRKAVLAFIAQLDVNELALFFAMLLKPLLSISKGSDTTADWFWSSHENYMNDFQAFNVLKFFTVDNINSLSWKKRYGFLHVIEDVLEVFDEFHVIPFLDLLMGCVVRVLGSCTSSLESAKSCGYSLVENYSNVNLNVPEKDGVVANPIMTSTAVKQLKDLRALTLKIISLALNKYEDHDFGYEFWDLFFTSVKPLVDGFKQEGSSSEKPSSLFSCFVAMSRSHNLVSLLYREKNLVADIFSILTVTTASEAIISCVLKFIENLLNLDSELDDEDVTIKKVLLPNIETLICSLHCLFQSCNATKRKLVKYPGETELRIFKLLSKYIKDPLQARKFIDNLLPFLGKKAQNSDACVEALQVIRDIIPVSGSETSPKILNAVSPLLISAGLDMRLAICDLLGVLAETDPSVLSVAKLISELNATSVMEMGGLDYDTIVHAYEKMSMEFFYTIPENQALVILSHCVYDMSSNELILRHSAYRLLVSFVEFSIQILRLEVKSGHEMPEAMVTSIADGCWTEACIQRMINKFLLKHMADAMGKETSVQKEWIDLLREMVLKLPEVPNLHSFKILCSDDPEVDFFNNILHLQKHRRSRALSRFRNAINVEGLPEVITNKVFVPLFLNMLFNVQDGKGEHIRSACLETLASICGHLEWKSYYALLMRCFREMTVKPDKQKVLLRLICSILDQFHFLETCSSQEAKDSMDHVSSTCTAEASSSTMFHSCTSSVTITEIQTCLHDTVFPRIQKLLNSDSDKVNVNISLAALKLLKLLPGDIMESQLSSIIHRISNFLRNRLESVRDDARSALAACLKELGLEYLQFIVSVLRATLKRGYELHVLGYTLHFILSKCLPISGKLDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRKRKSFETLKLIAQSIMFKSHALKLLSPVIAHLQNHLTPKVKLNLETMLNHIAAGIECNPSVDQTDLFIFVYGLVEDGISKENCRGEHSAVMETNEKRKTDEPRKKVSLGKVVGSESHYAHLITVFALGLLHNRIKNMKLNKKDGQLLSMLDPFVKQLGSCLSSKYEDILSAALRCIALLVRLPLPALETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQFPLFVDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILLQFLLDYHLSEKRLQQHLDFLLANLRYEHSTGRETVLEMIHTIIIKFPKSIVDEQSQTLFVHLVVCLTNDQDNKVRSMIGAAIKLLIGRISPHSLHPIIEYSLSWYLGEKQQLWSAAAQVLGFMIEVMKKGFQRHIESVLPVMRSILRLAVKCGTDNQLDLSNDVAIPLWKEAYYSLVMLEKMLQQFHELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEKSIETFSLVRPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPHQFWSAIEQHEQEHFLKAFQLLDSRKGRSIFESFMSSRIHNLNDQGNNEDLRHLLVSSLLKRMGKIALQMEAIQMKIVFNSFRTISTTIGQEECQHYAFQMLLPLYKVCEGFSGKVISDEVKQLAQEVSESIRDTLGIQNFVQVYSHIRKKLKAKRDKRKQEEKLMAVVNPMRNAKRKLRIAAKHRAHKKRKIMTMKMGRWVR